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Online Chem.Bio. Tools

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NCBI Genome Workbench. MyExperiment. Molinspiration WebME Editor. The PubChem Project. Oligo Design and Analysis Tools - IDT. Oligo Analyzer. Resource:Gene Ontology Tools - NeuroLex. Gene Ontology Tools. The information on this page is out of date.

Gene Ontology Tools

The Gene Ontology tools registry is now handled in association with NEUROLEX at this site. Please update your bookmarks. The GO tools collection contains tools developed by the GO Consortium and by third parties. We are currently updating our tools listings to provide users with more information. Please fill out the GO tool submission form if you would like your tool to be displayed in the tools collection on the GO website. We also maintain a list of useful ID mapping tools on the GO wiki.

Consortium Tools The tools below are developed within the Gene Ontology Consortium. AmiGO AmiGO provides an interface to search and browse the ontology and annotation data provided by the GO consortium. AmiGO accesses the GO mySQL database; more information is available from the GO database guide. ontology or annotation browserontology or annotation search engineontology or annotation visualizationslimmer-type toolterm enrichmentother analysis go-db-perl go-moose. Entrez cross-database search.

ORF Finder. Primer designing tool. Primer3Plus. DailyMed. DailyMed provides high quality information about marketed drugs.


Drug labeling on this Web site is the most recent submitted to the Food and Drug Administration (FDA) and currently in use; it may include, for example, strengthened warnings undergoing FDA review or minor editorial changes. These labels have been reformatted to make them easier to read. About DailyMed DailyMed provides high quality information about marketed drugs. This information includes FDA labels (package inserts). Drug labeling and other information in the SPL is what has been most recently submitted by drug companies to the Food and Drug Administration (FDA) as drug listing information (See 21 CFR part 207).

Other information about drugs may also be available. OPSIN: Open Parser for Systematic IUPAC Nomenclature. Free Statistical Software. Kendall tau Rank Correlation - Free Statistics and Forecasting Software (Calculators) v.1.1.23-r7. To cite in publications use:Wessa, P. (2014), Free Statistics Software, Office for Research Development and Education, version 1.1.23-r7, URL © All rights reserved.

Kendall tau Rank Correlation - Free Statistics and Forecasting Software (Calculators) v.1.1.23-r7

Academic license for non-commercial use only. The free use of the scientific content, services, and applications in this website is granted for non commercial use only. In any case, the source (url) should always be clearly displayed. Under no circumstances are you allowed to reproduce, copy or redistribute the design, layout, or any content of this website (for commercial use) including any materials contained herein without the express written permission. Information provided on this web site is provided "AS IS" without warranty of any kind, either express or implied, including, without limitation, warranties of merchantability, fitness for a particular purpose, and noninfringement.

Software Version : 1.1.23-r7Algorithms & Software : Patrick Wessa, PhDServer : Untitled. Collaborative Publishing. Galaxy. Molarity Calculator. Virtual Computational Chemistry Laboratory. LogP Calculator. Research / Software. Manipulation of input and output files related to whole-genome shotgun assembly.

Research / Software

Currently maintained at CBCB at the University of Maryland. CABOG assembles long sequences of genomic DNA given the fragmentary data produced by whole-genome shotgun sequencing. DNA Barcode Deconvolution This is a software library to run the JCVI barcode deconvolution pipeline using Sun Grid Engine, or optionally without the use of a grid. Elvira High throughput assembly of amplicon reads for virus-sized genomes. Lucy A tool for cleaning data produced by automated Sanger DNA sequencers prior to sequence assembly and other downstream uses.

TIGR Assembler Enabled the first published whole-genome assembly of a free-living organism in 1995. Middleware for organizing large chunks of data to free the client from having to encode data storage specifics. Glimmer A microbial gene-finding system, especially in bacteria, archaea, and viruses. A tool for analyzing and annotating eukaryotic genomic sequences. Manatee ANDES Tools. BioDataFit-EC50. Proteomics Tools. Reverse Complement. Cutter V2.0.