visualization
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Presenteer.js
Presenteer.js a very flexible HTML5 presentation tool that works in one line of code, but is configurable with constructor options and many callbacks. And then navigate through the presentation with presentation.start(); , presentation.next(); , presentation.prev(); and presentation.show(0-based-index); To go back, call presentation.prev(); or presentation.previous(); . If the start of the presentation is reached, the last element will be shown again. I set followElementTransforms to false to not follow element transforms. Consequently, we don't need the Sylvester matrix libraries.inkscape
Parallel coordinates - Wikipedia, the free encyclopedia
Parallel coordinates is a common way of visualizing high-dimensional geometry and analyzing multivariate data . To show a set of points in an n -dimensional space , a backdrop is drawn consisting of n parallel lines, typically vertical and equally spaced. A point in n -dimensional space is represented as a polyline with vertices on the parallel axes; the position of the vertex on the i th axis corresponds to the i th coordinate of the point. [ edit ] HistoryPicviz Labs
Picviz Labs is keen to collaborate with like minded businesses, associations and industry experts. Partnerships of this kind ensure Picviz Labs can continue to strengthen it´s product and service suite whilst maintaining our position at the forefront of the big-data and cyber security community.
About Clustergrams In 2002, Matthias Schonlau published in “The Stata Journal” an article named “ The Clustergram: A graph for visualizing hierarchical and . As explained in the abstract:
Clustergram: visualization and diagnostics for cluster analysis (R code) | R-statistics blog
Parallel coordinates plot - MATLAB
parallelcoords(X) creates a parallel coordinates plot of the multivariate data in the n -by- p matrix X . Rows of X correspond to observations, columns to variables. A parallel coordinates plot is a tool for visualizing high dimensional data, where each observation is represented by the sequence of its coordinate values plotted against their coordinate indices. parallelcoords treats NaN s in X as missing values and does not plot those coordinate values. parallelcoords(X,...
▲ Circos is a tool for visualizing data in a circular layout. It is widely used in genomics and cancer biology, but can show any kind of data. ( Learn more ) ▲ Many kind of data tracks are supported. Shown here is a small sample: links, tiles and heatmaps. ( Learn more ) Circos is particularly suited for visualizing alignments, conservation and intra and inter-chromosomal relationships. ( presentations on Circos ; drawn heavily from Tufte's Visual Display of Quantitative Information ) ▲ Circos in the literature.
Data Visualization, Design and Information Munging // Martin Krzywinski / Genome Sciences Center
Flare | Data Visualization for the Web
Flare is open-source software released under a BSD license , meaning it can be freely deployed and modified (and even sold for $$). Flare's design was adapted from its predecessor prefuse , a visualization toolkit for Java. 2010.01.29 : Flare was used to help ABC News' Good Morning America show that George Stephanopoulos may be related to Hillary Clinton (go to 4:48 in the video). 2009.02.10 : MemeTracker crawls 1.6 million mainstream media and blog sites, analyzes what people talk about, and visualizes the results using Flare.
Circular visualization Circos is a software package for visualizing data and information . It visualizes data in a circular layout — this makes Circos ideal for exploring relationships between objects or positions. There are other reasons why a circular layout is advantageous, not the least being the fact that it is attractive. Circos is ideal for creating publication-quality infographics and illustrations with a high data-to-ink ratio , richly layered data and pleasant symmetries. You have fine control each element in the figure to tailor its focus points and detail to your audience.
Introduction to Circos, Features and Uses // CIRCOS Circular Genome Data Visualization
Processing is an open source programming language and environment for people who want to create images, animations, and interactions. Initially developed to serve as a software sketchbook and to teach fundamentals of computer programming within a visual context, Processing also has evolved into a tool for generating finished professional work. Today, there are tens of thousands of students, artists, designers, researchers, and hobbyists who use Processing for learning, prototyping, and production. To contribute to the development, please visit Processing on Google Code to read instructions for downloading the code , building from the source , reporting and tracking bugs , and creating libraries and tools .
Processing.org
Join the discussion (Rich Morin) about hive plots in d3.js ( demo , github ). New to hive plots? See this Useful d3.js + hive plot intro by Mike Bostock. The hive plot is a rational visualization method for drawing networks. Nodes are mapped to and positioned on radially distributed linear axes — this mapping is based on network structural properties. Edges are drawn as curved links.
Hive Plots - Linear Layout for Network Visualization - Visually Interpreting Network Structure and Content Made Possible
Hive Plots - Linear Layout for Network Visualization - Visually Interpreting Network Structure and Content Made Possible
Join the discussion (Rich Morin) about hive plots and d3.js implementation . New to hive plots: useful d3+hive plot intro by Mike Bostock. The hive plot is a rational visualization method for drawing networks. Nodes are mapped to and positioned on radially distributed linear axes — this mapping is based on network structural properties.EBI researchers have changed our view of 4 billion years of microbial evolution. Christos Ouzounis and colleagues have gained intriguing quantitative insights into how gene families are transferred, not only 'vertically' through passage from one organism to its progeny, but also 'horizontally' through the exchange of genetic material between distantly related organisms. Since the time of Darwin, the evolutionary relationships between organisms have been represented as a tree, with the common ancestors at the base of the trunk and the most recently evolved species at the tips of the branches.