TD UE 2.13 - exemple
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NCBI Blast:(1) - NG_007471:Homo sapiens nuclear receptor subfami
pourquoi le "hit" SYCP1 est-il présent ? by Mar 18
Entrez Genome view
comment expliquer les "hits" sur d'autres chromosomes que le chromosome 1 ? by Mar 18
BLAST finds regions of similarity between biological sequences. more... The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences. The program compares nucleotide or protein sequences to sequence databases and calculates the statistical significance of matches. BLAST can be used to infer functional and evolutionary relationships between sequences as well as help identify members of gene families. BLAST Assembled RefSeq Genomes Basic BLAST
BLAST: Basic Local Alignment Search Tool
This track comprises multiple analyses Annotation produced by the Ensembl genebuild and projected to the alternate locus via a mapping from the primary assembly . Non-coding RNAs (ncRNAs) predicted using sequences from RFAM and miRBase . See article .
genome browser 57: Homo sapiens - Gene summary - Gene: NR1H5P (E
genome browser 57: Homo sapiens - Marked-up sequence - Gene: NR1
In Ensembl we provide displays at two levels: Transcript views which provide information specific to an individual transcript such as the cDNA and CDS sequences and protein domain annotation. Gene views which provide displays for data associated at the gene level such as orthologues, paralogues, regulatory regions and splice variants.genome browser 57: Homo sapiens - Marked-up sequence - Gene: NR1
In Ensembl we provide displays at two levels: Transcript views which provide information specific to an individual transcript such as the cDNA and CDS sequences and protein domain annotation. Gene views which provide displays for data associated at the gene level such as orthologues, paralogues, regulatory regions and splice variants. This view is a gene level view. To access the transcript level displays select a Transcript ID in the table above and then navigate to the information you want using the menu at the left hand side of the page. To return to viewing gene level information click on the Gene tab in the menu bar at the top of the page.
This track comprises multiple analyses Annotation produced by the Ensembl genebuild and projected to the alternate locus via a mapping from the primary assembly . Non-coding RNAs (ncRNAs) predicted using sequences from RFAM and miRBase . See article .
genome browser 57: Homo sapiens - Gene summary - Gene: NR1H5P (E
In Ensembl we provide displays at two levels: Transcript views which provide information specific to an individual transcript such as the cDNA and CDS sequences and protein domain annotation. Gene views which provide displays for data associated at the gene level such as orthologues, paralogues, regulatory regions and splice variants. This view is a gene level view. To access the transcript level displays select a Transcript ID in the table above and then navigate to the information you want using the menu at the left hand side of the page.
genome browser 57: Homo sapiens - Genomic alignments - Gene: NR1
In Ensembl we provide displays at two levels: Transcript views which provide information specific to an individual transcript such as the cDNA and CDS sequences and protein domain annotation. Gene views which provide displays for data associated at the gene level such as orthologues, paralogues, regulatory regions and splice variants. This view is a gene level view.
genome browser 57: Canis familiaris - Gene summary - Gene: XM_84
genome browser 57: Homo sapiens - -
Example page Background Whole genome aligments include "pairwise" sequence alignments between two species, and multi-species alignments using genomes of more than two species.
genome browser 57: Homo sapiens - Genomic alignments - Gene: NR1
In Ensembl we provide displays at two levels: Transcript views which provide information specific to an individual transcript such as the cDNA and CDS sequences and protein domain annotation. Gene views which provide displays for data associated at the gene level such as orthologues, paralogues, regulatory regions and splice variants.In Ensembl we provide displays at two levels: Transcript views which provide information specific to an individual transcript such as the cDNA and CDS sequences and protein domain annotation. Gene views which provide displays for data associated at the gene level such as orthologues, paralogues, regulatory regions and splice variants. This view is a gene level view. To access the transcript level displays select a Transcript ID in the table above and then navigate to the information you want using the menu at the left hand side of the page. To return to viewing gene level information click on the Gene tab in the menu bar at the top of the page.
genome browser 57: Homo sapiens - Genomic alignments - Gene: NR1
Abstract | Identification and analysis of unitary pseudogenes: h
Gene loss is indicated by the absence of orthologs After a speciation event, the increasing divergence between two resultant species reflects the diminution in their genic orthology as gains and losses of genes gradually accumulate in each of them. Thus, the presence of genes unique to one species relative to another indicates either gene gains in one or gene losses in the other. In common with many other genomic features, genes in all species are in a state of flux during evolution. However, since all species are related to one another through speciation, gains and losses of genes in one species can be identified only relative to another. Based on this observation, we developed a pipeline that uses the orthologous relationship between genes from a pair of species to detect gene losses in one of them.Genome biology
recherche dans le génome de souris (Mus musculus) by Mar 18
NCBI Blast:(6) - ref|NG_007471.1| (20382 letters)
Mouse genomic (G+T)/discontiguous megablast by Mar 18
NCBI Blast:(5) - ref|NG_007471.1| (20382 letters)
résultats de la recherche dans le génome de souris by Mar 18
NCBI Blast:(4) - ref|NG_007471.1| (20382 letters)
comparer les résultats avec la recherche précédente by Mar 18
NCBI Blast:(3) - NG_007471:Homo sapiens nuclear receptor subfami
analyser la nature des gènes trouvés et la localisation chromosomique by Mar 18
reference geomic/Pan troglodytes/discontiguous megablast by Mar 18
NCBI Blast:(2) - NG_007471:Homo sapiens nuclear receptor subfami
nucleotide collection/megablast by Mar 18