Databases

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DIANA miRGen. MiRGen is an integrated database of: positional relationships between animal miRNAs and genomic annotation sets animal miRNA targets according to combinations of widely used target prediction programs miRGen has three connected interfaces which query this data. The Genomics interface allows the user to explore where whole-genome collections of miRNAs are located with respect to UCSC genome browser annotation sets such as Known Genes, Refseq Genes, Genscan predicted genes, CpG islands, and pseudogenes. The Targets interface provides access to unions and intersections of four widely used target prediction programs, and experimentally supported targets from TarBase.

UCSC. BRENDA. PDB. ExPASy. Ensembl. CHIP. NCBI.