bioinformatics
Bioinformática aplicada
cursos 2005/2007 Licenciatura en Ciencias Genómicas, UNAM ©Bruno Contreras-Moreira and Heladia Salgado Con aportaciones de Cei Abreu-GoodgerInternships | ISCB Student Council
Welcome to the Internship section of the ISCB-Student Council website. As a student managed body we understand it is important to get the right guidance and a good mentor during the early years of training. We aim to address these challenges by organizing internships for undergraduate and graduate students in collaboration with leading international research labs and institutions working in the field of computational biology. Applications open now!
Authors . Alexey G. Murzin, John-Marc Chandonia, Antonina Andreeva, Dave Howorth, Loredana Lo Conte, Bartlett G. Ailey, Steven E. Brenner, Tim J. P.
SCOP: Structural Classification of Proteins
Algoritmos en bioinformática estructural
Siguiente: TEORÍA: Fundamentos de estructura de macromoléculas Algoritmos en bioinformática estructural Bruno Contreras-Moreira http://www.eead.csic.es/compbio Fundación ARAID y Estación Experimental de Aula Dei / CSIC , Zaragoza, España Tras un breve repaso de conceptos bioquímicos, este material presenta y analiza unos cuantos algoritmos básicos para el estudio de la estructura molecular de proteínas y ácidos nucleicos. Al igual que en muchos libros de texto, iremos introduciendo problemas (y estrategias para resolverlos) desde el nivel de estructura primaria al nivel de estructura cuaternaria. A lo largo del curso encontraréis referencias a artículos que profundizan sobre aspectos particulares de cada tema, junto con ejemplos y ejercicios que a veces requieren de ciertos conocimientos de programación (en Perl y Python).
Dangle an updated and more general version of our program Dang in that it reads coordinates from a Protein DataBank (PDB) coordinate file for either protein or nucleic acid and generates geometric measurements for each residue. It is different from Dang in that Dangle: is Java-based, includes the capability of reporting deviations from ideal geometry as well as measurement values, and has a very flexible input syntax for specified the measurements desired. Dangle output is given as colon-delimited values, one line per residue. It is designed for facile use in scripts, and is the usual source of input for Suitename , either to generate the data for MolProbity's multi-criterion table or in individual command-line use. Usage information is available by typing "dangle -help" with the dangle shell script installed (or by typing "java -cp chiropraxis.jar chiropraxis.dangle.Dangle -help"). The output from dangle's help flag is readable online.
Dangle Software :: Kinemage Website
Ramachandran Plot - Proteopedia, life in 3D
From Proteopedia (Redirected from Ramachandran Plots ) Ramachandran plot and contours from 100,000 high-quality general-case datapoints The Ramachandran plot is a plot of the torsional angles - phi (φ)and psi (ψ) - of the residues (amino acids) contained in a peptide.
Siguiente: TEORÍA: Fundamentos de estructura de macromoléculas Algoritmos en bioinformática estructural Bruno Contreras-Moreira http://www.eead.csic.es/compbio Fundación ARAID y Estación Experimental de Aula Dei / CSIC , Zaragoza, España
Algoritmos en bioinformática estructural
Search for promoters/functional motifs
The programs usage in Scientific publications List of Plant Regsite database factors used in TSSP and NSITE-PL programs FPROM / Human promoter prediction [ Help ] [ Example ] PATTERN / pattern search [ Help ] [ Example ]