Tools/Tech
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Tutoriales Cytoscape
A Cytoscape tutorial series of lectures, videos, and exercises can be found at http://www.csc.fi/english/research/sciences/bioscience/Courses_and_events/cytoscape/index_html .
Cytoscape: An Open Source Platform for Complex Network Analysis and Visualization
Cytoscape project needs your support! Please cite either of the following papers when you use Cytoscape in your publications, which is very important to sustain our federal funding.
Walrus - Graph Visualization Tool
Walrus is a tool for interactively visualizing large directed graphs in three-dimensional space.prefuse | interactive information visualization toolkit
Prefuse is a set of software tools for creating rich interactive data visualizations.
Flare is open-source software released under a BSD license , meaning it can be freely deployed and modified (and even sold for $$). Flare's design was adapted from its predecessor prefuse , a visualization toolkit for Java.