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National Center for Biotechnology Information MG-RAST - Home GenoCAD: CAD Software for Synthetic Biology IMP: Integrative Multi-species Prediction GeneMANIA » search for MRE11A, RAD51, MLH1, MSH2, DMC1, RAD51AP1, RAD50, MSH6, XRCC3, PCNA, XRCC2 in H. sapiens StratomeX — Institute for Computer Graphics and Vision Demonstration Video of Caleydo StratomeX Caleydo StratomeX is a visualization technique for the analysis of multiple stratified datasets. A good example for such an analysis scenario is the identification and characterization of cancer subtypes. StratomeX can be used to explore the results of data analysis systems developed to perform analyses of TCGA data. StratomeX makes such analysis results easier accessible and requires no scripting. The core concept of our approach is to visualize stratifications (groupings) of samples (patients) and the relationships between these groupings in a given cancer type. Groups can also be derived from copy number levels of a particular gene or gene mutation status, e.g., one group for “wild-type”, one for “mutated”. In the visualization, stratifications are represented as columns and the individual groups are represented as bricks in these columns. To learn more about Caleydo StratomeX refer to the Caleydo help pages. Examples Clustering comparisons Help

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