Databases
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Curation Rules The curation rules are explained in full in the Curation Manual. Individual databases may locally impose additional rules, but these will be additional to and not break the agreed IMEx guidelines.
Curation | The International Molecular Exchange Consortium
OSPREY: Network Visualization System
Today, Osprey version 1.2.0 was released to the public. This version is fully compatible with Mac OS X, RedHat Linux, and all version of Microsoft Windows Some changes implemented in this release include:
Protein-Protein Interaction Databases The Biological General Repository for Interaction Datasets (BioGRID) database was developed to house and distribute collections of protein and genetic interactions from major model organism species. BioGRID currently contains over 198 000 interactions from six different species, as derived from both high-throughput studies and conventional focused studies.
Protein Interaction Analysis
dip.doe-mbi.ucla.edu/dip/Download.cgi
Various subsets of the DIP interaction data are available in a variety of formats : PSI-MI (versions 1.0 and 2.5 ), MITAB2.5 and our legacy XIN format. The sequences of the proteins participating in DIP interactions are provided in FASTA format. In addition, some more detailed information about the interactions of S.cerevisiae proteins are also provided in the form of tab-delimited files.