Enabling RNA therapy. RNAi Therapeutics. RNA Structure Atlas. Repbase - GIRI.
List of RNA structure prediction software. This list of RNA structure prediction software is a compilation of software tools and web portals used for RNA structure prediction. [ edit ] Single sequence secondary structure prediction [ edit ] Single sequence tertiary structure prediction [ edit ] Comparative methods The single sequence methods mentioned above have a difficult job detecting a small sample of reasonable secondary structures from a large space of possible structures. A good way to reduce the size of the space is to use evolutionary approaches. Structures that have been conserved by evolution are far more likely to be the functional form. The methods below use this approach. [ edit ] Inter molecular interactions: RNA-RNA Many ncRNAs function by binding to other RNAs. . [ edit ] Inter molecular interactions: MicroRNA:UTR MicroRNAs regulate protein coding gene expression by binding to 3' UTRs , there are tools specifically designed for predicting these interactions.
. [ edit ] ncRNA gene prediction software [ edit ] Benchmarks. LNA and BNA.