Ebi.ac. Multiple Sequence Alignment (MSA) is generally the alignment of three or more biological sequences (protein or nucleic acid) of similar length. From the output, homology can be inferred and the evolutionary relationships between the sequences studied. By contrast, Pairwise Sequence Alignment tools are used to identify regions of similarity that may indicate functional, structural and/or evolutionary relationships between two biological sequences.
Clustal Omega New MSA tool that uses seeded guide trees and HMM profile-profile techniques to generate alignments. Launch Clustal Omega Kalign Very fast MSA tool that concentrates on local regions. Launch Kalign MSA tool that uses Fast Fourier Transforms. Launch MAFFT Accurate MSA tool, especially good with proteins. Launch MUSCLE MView Transform a Sequence Similarity Search result into a Multiple Sequence Alignment or reformat a Multiple Sequence Alignment using the MView program. Launch MView T-Coffee Launch T-Coffee WebPRANK. Mafft. Muscle. T-Coffee. MARNA. PAL2NAL. Welcome to Rost lab: error. The lab's research is driven by a conviction that protein and DNA sequences encode a significant core of information about the ultimate structure and function of genetic material and its gene products. Please have a look at the projects for more information about our research Research Motivation Watch a short video from the Humboldt foundation giving an overview over the lab's research motivation.
Predict Protein PredictProtein at www.predictprotein.org is a service that combines diverse protein sequence analysis tools. Click on the logo to find out more about PredictProtein.