PubMed mining. GoBean: a Java application for Gene Ontology enrichment analysis. Ontologizer - Computational Biology Group. Mac OS X users, who experienced problems starting Ontologizer, may want to disable Java7 support for starting Webstart applications until the problem is solved.
See for instructions. Thanks to Christine Oger for finding this work-arround. A number of methods have been developed to analyze microarray and other high-throughput data derived from measurements of hundreds or thousands of genes or proteins. Depending on the method, the results of analysis consist of a list of many differentially regulated genes or a partitioning of many or all of the genes in the data set into clusters (groups) that putatively share some functionally relevant characteristic.
Among the many uses to which the Gene Ontology (GO) has been put is to provide a summary of such lists of genes/proteins according to functional role, biochemical reaction, or location of the gene product in the cell. DAVID Functional Annotation Bioinformatics Microarray Analysis.