background preloader

Sys Bio Tools

Facebook Twitter

CellDesigner. Cell Designer. AMEN. About. 1_Installing_AMEN_v2.pdf (application/pdf Object) Protovis. Protovis composes custom views of data with simple marks such as bars and dots. Unlike low-level graphics libraries that quickly become tedious for visualization, Protovis defines marks through dynamic properties that encode data, allowing inheritance, scales and layouts to simplify construction. Protovis is free and open-source, provided under the BSD License.

It uses JavaScript and SVG for web-native visualizations; no plugin required (though you will need a modern web browser)! Although programming experience is helpful, Protovis is mostly declarative and designed to be learned by example. Protovis is no longer under active development.The final release of Protovis was v3.3.1 (4.7 MB). The Protovis team is now developing a new visualization library, D3.js, with improved support for animation and interaction. This project was led by Mike Bostock and Jeff Heer of the Stanford Visualization Group, with significant help from Vadim Ogievetsky.

Updates May 28, 2010 - ZOMG! Getting Started. Gephi, an open source graph visualization and manipulation software. Gource - software version control visualization. Gource is a software version control visualization tool. See more of Gource in action on the Videos page. Introduction Software projects are displayed by Gource as an animated tree with the root directory of the project at its centre. Directories appear as branches with files as leaves.

Currently Gource includes built-in log generation support for Git, Mercurial, Bazaar and SVN (as of 0.29). Synopsis view the log of the repository (Git, SVN, Mercurial and Bazaar) in the current path: gource Donations If you like Gource and would like to show your appreciation and encourage future work on this and other open source projects by the author, please consider making a donation!

Bitcoin: 15WP34zkaZFJCyzCAKLt9qrWSvDuBN7XLv Related Software You may also want to check out Logstalgia, a web server access log visualization tool. News 14 April 2014 Gource 0.41 has been released. You can now specify a date range directly with --start-date and --stop-date (using 'YYYY-MM-DD hh:mm:ss' ISO format). 26 April 2013. Gource - Software Version Control Visualization Tool.

Orange - Data Mining Fruitful & Fun. Cell Illustrator - Cell Illustrator 5.0. DAVID Functional Annotation Bioinformatics Microarray Analysis. Pathways.